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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs61858953 chr10:88958729 A/G FAM35B chr10:46897641-46939143:+ 0.61 9.9 3.95E-21 Box Plot
THCA rs61885174 chr11:49102503 C/T FOLH1B chr11:89372395-89431886:+ 0.66 5.95 5.2E-9 Box Plot
THCA rs61896745 chr11:48935984 T/G FOLH1B chr11:89372395-89431886:+ 0.48 6.43 3.11E-10 Box Plot
THCA rs61898223 chr11:48946017 T/C FOLH1B chr11:89372395-89431886:+ 0.45 6.51 1.87E-10 Box Plot
THCA rs61904166 chr11:49581461 T/C FOLH1B chr11:89372395-89431886:+ -0.35 -6.44 2.9E-10 Box Plot
THCA rs61930532 chr11:48667719 T/A FOLH1B chr11:89372395-89431886:+ 0.44 6.36 4.81E-10 Box Plot
THCA rs61932767 chr11:48704806 C/T FOLH1B chr11:89372395-89431886:+ 0.42 6.21 1.17E-9 Box Plot
THCA rs61937247 chr12:56381484 A/C RPS26P11 chrX:71264395-71264742:+ 0.5 8.83 1.95E-17 Box Plot
THCA rs61937248 chr12:56381705 C/T RPS26P11 chrX:71264395-71264742:+ 0.5 8.83 1.95E-17 Box Plot
THCA rs61937249 chr12:56381916 A/G RPS26P11 chrX:71264395-71264742:+ 0.5 8.83 1.95E-17 Box Plot
THCA rs61938962 chr12:56446766 C/T RPS26P11 chrX:71264395-71264742:+ 0.53 9.11 2.27E-18 Box Plot
THCA rs61938963 chr12:56446804 C/T RPS26P11 chrX:71264395-71264742:+ 0.53 9.11 2.27E-18 Box Plot
THCA rs61998333 chr15:30973270 C/T CHRNA7 chr15:32215641-32465219:+ 0.4 8.67 6.94E-17 Box Plot
THCA rs61998393 chr15:31022261 A/G CHRNA7 chr15:32215641-32465219:+ 0.4 8.44 3.95E-16 Box Plot
THCA rs61998398 chr15:31040421 T/C CHRNA7 chr15:32215641-32465219:+ 0.3 7.09 4.87E-12 Box Plot